I've use the Yamaha online parts fiche but the drawing is not detalied enough. I've seen that YZF600 fork seal replacement site before but still don't see exactly what I am looking for. I even brought the parts to a Yamaha dealer and they did not know.
That being said, I did go with #2 and have not experienced any unusual effects that I can tell. I'm going to be taking my forks apart again this weekend so I thought I would refresh this question which I first posed last year on a few sites. So I guess I'll stick with #2. Thanks everybody.